Add a separate wgrib2-builder stage that compiles wgrib2 from source. Docker layer caching means this only builds once — subsequent deploys reuse the cached layer. The binary is copied into the final runtime image. Also fixed wgrib2 path lookup to be runtime instead of compile-time so it works in the Docker build pipeline.
165 lines
4.9 KiB
Elixir
165 lines
4.9 KiB
Elixir
defmodule Microwaveprop.Weather.Grib2.Wgrib2 do
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@moduledoc """
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Fast GRIB2 grid extraction using the wgrib2 binary.
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Uses wgrib2's `-lola` option to interpolate HRRR Lambert Conformal data
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onto a regular lat-lon grid, outputting IEEE 754 binary floats.
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Falls back to the pure-Elixir decoder if wgrib2 is not available.
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"""
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require Logger
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@undefined_value 9.999e20
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@doc """
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Extract values from a GRIB2 binary at a regular lat-lon grid.
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Takes the raw GRIB2 binary data, a regex pattern to match desired messages
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(e.g. ":(TMP|DPT|PRES):"), and grid specification.
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Returns `{:ok, %{{lat, lon} => %{"VAR:LEVEL" => float}}}` or `{:error, reason}`.
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"""
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def extract_grid(grib_binary, match_pattern, grid_spec) do
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if available?() do
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extract_with_wgrib2(grib_binary, match_pattern, grid_spec)
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else
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{:error, :wgrib2_not_available}
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end
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end
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@doc "Check if wgrib2 is available on the system."
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def available?, do: wgrib2_path() != nil
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defp wgrib2_path, do: System.find_executable("wgrib2")
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defp extract_with_wgrib2(grib_binary, match_pattern, grid_spec) do
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%{
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lon_start: lon_start,
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lon_count: lon_count,
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lon_step: lon_step,
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lat_start: lat_start,
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lat_count: lat_count,
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lat_step: lat_step
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} = grid_spec
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# wgrib2 uses 0-360 longitude convention
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wgrib2_lon_start = normalize_lon(lon_start)
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lon_spec = "#{wgrib2_lon_start}:#{lon_count}:#{lon_step}"
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lat_spec = "#{lat_start}:#{lat_count}:#{lat_step}"
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# Write GRIB to temp file
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tmp_grib = Path.join(System.tmp_dir!(), "hrrr_#{System.unique_integer([:positive])}.grib2")
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tmp_bin = tmp_grib <> ".lola.bin"
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try do
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File.write!(tmp_grib, grib_binary)
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# Run wgrib2: match desired messages, extract to regular lat-lon grid as binary
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args = [
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tmp_grib,
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"-match",
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match_pattern,
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"-lola",
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lon_spec,
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lat_spec,
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tmp_bin,
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"bin"
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]
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case System.cmd(wgrib2_path(), args, stderr_to_stdout: true) do
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{output, 0} ->
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# Parse message inventory from stdout to know which vars were extracted
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messages = parse_wgrib2_inventory(output)
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case File.read(tmp_bin) do
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{:ok, bin_data} ->
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parse_lola_binary(bin_data, messages, grid_spec)
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{:error, :enoent} ->
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# No output file means no matching messages
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{:ok, %{}}
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{:error, reason} ->
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{:error, "Failed to read wgrib2 output: #{inspect(reason)}"}
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end
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{output, exit_code} ->
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{:error, "wgrib2 failed (exit #{exit_code}): #{String.slice(output, 0, 200)}"}
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end
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after
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File.rm(tmp_grib)
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File.rm(tmp_bin)
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end
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end
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defp parse_wgrib2_inventory(output) do
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output
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|> String.split("\n")
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|> Enum.flat_map(fn line ->
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case String.split(line, ":", parts: 8) do
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[_n, _offset, _date, var, level | _] ->
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[%{var: var, level: level}]
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_ ->
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[]
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end
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end)
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end
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defp parse_lola_binary(bin_data, messages, grid_spec) do
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%{lon_count: nx, lat_count: ny, lon_start: lon_start, lon_step: lon_step, lat_start: lat_start, lat_step: lat_step} =
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grid_spec
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points_per_message = nx * ny
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bytes_per_message = points_per_message * 4
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result =
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messages
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|> Enum.with_index()
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|> Enum.reduce(%{}, fn {msg, msg_idx}, acc ->
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offset = msg_idx * bytes_per_message
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key = "#{msg.var}:#{msg.level}"
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if offset + bytes_per_message <= byte_size(bin_data) do
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chunk = binary_part(bin_data, offset, bytes_per_message)
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merge_message_values(acc, key, chunk, nx, ny, lon_start, lon_step, lat_start, lat_step)
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else
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acc
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end
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end)
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{:ok, result}
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end
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defp merge_message_values(acc, key, chunk, nx, ny, lon_start, lon_step, lat_start, lat_step) do
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# Binary is row-major: lat varies slowest, lon varies fastest
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# Each value is a 32-bit IEEE 754 little-endian float
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Enum.reduce(0..(ny - 1), acc, fn j, acc_outer ->
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lat = Float.round(lat_start + j * lat_step, 3)
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Enum.reduce(0..(nx - 1), acc_outer, fn i, acc_inner ->
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offset = (j * nx + i) * 4
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<<_::binary-size(offset), value::float-little-32, _::binary>> = chunk
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if value > @undefined_value / 2 do
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# Skip undefined values (ocean/outside-domain points)
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acc_inner
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else
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lon = Float.round(denormalize_lon(lon_start + i * lon_step), 3)
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point = {lat, lon}
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existing = Map.get(acc_inner, point, %{})
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Map.put(acc_inner, point, Map.put(existing, key, value))
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end
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end)
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end)
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end
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# Convert -125.0 to 235.0 for wgrib2
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defp normalize_lon(lon) when lon < 0, do: lon + 360.0
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defp normalize_lon(lon), do: lon
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# Convert back from 0-360 to -180..180
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defp denormalize_lon(lon) when lon > 180.0, do: lon - 360.0
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defp denormalize_lon(lon), do: lon
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end
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